Raphael Group Github

Raphael Group Github Raphael group has 98 repositories available. follow their code on github. Our research is focused on bioinformatics and computational biology. current research interests include cancer genomics and evolution, single cell and spatial sequencing, network analysis of disease mutations, genome rearrangements, and structural variation.

Raphael Lab Hotnet Hatchet is an algorithm to infer allele and clone specific copy number aberrations (cnas), clone proportions, and whole genome duplications (wgd) for several tumor clones jointly from multiple bulk tumor samples of the same patient or from a single bulk tumor sample. See gaston github repository for the current version of the software and documentation: github raphael group gaston. Hatchet is an algorithm to infer allele and clone specific copy number aberrations (cnas), clone proportions, and whole genome duplications (wgd) for several tumor clones jointly from multiple bulk tumor samples of the same patient or from a single bulk tumor sample. Raphael group has 98 repositories available. follow their code on github.

Github Raphael Group Gaston Hatchet is an algorithm to infer allele and clone specific copy number aberrations (cnas), clone proportions, and whole genome duplications (wgd) for several tumor clones jointly from multiple bulk tumor samples of the same patient or from a single bulk tumor sample. Raphael group has 98 repositories available. follow their code on github. This page lists some of the software packages developed in the group, organized by topic. for the most up to date list of software, please visit the group github repository. Gaston is an interpretable deep learning model for learning a topographic map of a tissue slice from spatially resolved transcriptomics (srt) data. specifically, gaston models gene expression topography by learning the isodepth, a 1 d coordinate that smoothly varies across a tissue slice. We study the role of structural variation (genome rearrangements, segmental duplications, and repeats) in evolution and human genetics. Contribute to raphael group gaston mix development by creating an account on github.

Aa Raphael Github This page lists some of the software packages developed in the group, organized by topic. for the most up to date list of software, please visit the group github repository. Gaston is an interpretable deep learning model for learning a topographic map of a tissue slice from spatially resolved transcriptomics (srt) data. specifically, gaston models gene expression topography by learning the isodepth, a 1 d coordinate that smoothly varies across a tissue slice. We study the role of structural variation (genome rearrangements, segmental duplications, and repeats) in evolution and human genetics. Contribute to raphael group gaston mix development by creating an account on github.